| Pick | Team | Player | Elapsed Time |
| ROUND 1 | |||
| 1 | Indy Colts | Lilly, Ted SP CHC | |
| 2 | Indy Colts | Hanson, Tommy P ATL | |
| 3 | West Lake Loggers | Pujols, Albert 1B STL | |
| 4 | Rock River Catfish | McCutchen, Andrew CF PIT | |
| 5 | West Lake Loggers | Zito, Barry SP SF | 6 min 18 sec |
| 6 | Pompano Sugar Kings | Bumgarner, Madison SP SF | 5 min 6 sec |
| 7 | Meddybemps Lakers | Pineiro, Joel SP ANA | 2 min 46 sec |
| 8 | New York Knights | Oswalt, Roy SP HOU | 51 sec |
| 9 | Tampico Stogies | Posey, Buster C SF | 4 min 50 sec |
| 10 | New York Knights | Wells, Randy SP CHC | 34 sec |
| 11 | Ontario River Kings | Latos, Mat SP SD | 55 sec |
| 12 | East Saint Flyers | McGehee, Casey 3B MIL | 5 min 31 sec |
| 13 | Dyersville Spirits | Lee, Carlos N. LF HOU | 8 sec |
| 14 | South Florida Chupacabras | Kawakami, Kenshin SP ATL | 2 min 19 sec |
| 15 | Ontario River Kings | Rasmus, Colby CF STL | 3 min 43 sec |
| 16 | North Coast Clippers | Kouzmanoff, Kevin 3B OAK | 6 min 7 sec |
| ROUND 2 | |||
| 1 | Tampico Stogies | Blanks, Kyle RF SD | 2 min 15 sec |
| 2 | Indy Colts | Coghlan, Chris LF FLA | 1 min 32 sec |
| 3 | Rock River Catfish | Jones, Garrett RF PIT | 8 sec |
| 4 | Ontario River Kings | Weeks, Rickie 2B MIL | 1 min 42 sec |
| 5 | Meddybemps Lakers | Soriano, Rafael RP TB | 48 sec |
| 6 | Pompano Sugar Kings | Cantu, Jorge 1B FLA | 12 sec |
| 7 | Indy Colts | Torres, Andres CF SF | 3 min 40 sec |
| 8 | North Coast Clippers | Cabrera, Everth SS SD | 3 sec |
| 9 | New York Knights | Norris, Bud SP HOU | 4 min 51 sec |
| 10 | Dyersville Spirits | Gregerson, Luke RP SD | 3 min 49 sec |
| 11 | New York Knights | Sheets, Ben SP OAK | 7 min 33 sec |
| 12 | East Saint Flyers | Belisario, Ronald RP LA | 15 sec |
| 13 | Meddybemps Lakers | Jackson, Conor LF ARI | 3 min 55 sec |
| 14 | South Florida Chupacabras | West, Sean SP FLA | 3 min 43 sec |
| 15 | Ontario River Kings | Medlen, Kris RP ATL | 5 min 7 sec |
| 16 | Ontario River Kings | Zimmermann, Jordan SP WAS | 2 min 40 sec |
| ROUND 3 | |||
| 1 | Dyersville Spirits | Fuld, Sam LF CHC | 3 min 3 sec |
| 2 | Indy Colts | Stubbs, Drew CF CIN | 2 min 15 sec |
| 3 | Rock River Catfish | Gutierrez, Juan RP ARI | 8 sec |
| 4 | Bangor Basselopes | Harris, Willie CF WAS | 1 min 15 sec |
| 5 | Rock River Catfish | Chacin, Jhoulys RP COL | 22 sec |
| 6 | Pompano Sugar Kings | Poreda, Aaron RP SD | 5 min 5 sec |
| 7 | Tampico Stogies | Nix, Jayson 2B CHW | 2 min 46 sec |
| 8 | North Coast Clippers | Stammen, Craig SP WAS | 13 min 29 sec |
| 9 | North Coast Clippers | Stauffer, Tim SP SD | 2 min 15 sec |
| 10 | New York Knights | Desmond, Ian SS WAS | 10 sec |
| 11 | Bangor Basselopes | Hawksworth, Blake RP STL | 3 min 22 sec |
| 12 | East Saint Flyers | Gregg, Kevin RP TOR | 1 min 10 sec |
| 13 | Meddybemps Lakers | Meek, Evan RP PIT | 2 min 52 sec |
| 14 | South Florida Chupacabras | Zavada, Clay RP ARI | 7 min 13 sec |
| 15 | Ontario River Kings | Freese, David 3B STL | 30 sec |
| 16 | North Coast Clippers | Augenstein, Bryan SP ARI | 2 min 34 sec |
| ROUND 4 | |||
| 1 | Bangor Basselopes | Badenhop, Burke RP FLA | 4 min 27 sec |
| 2 | Indy Colts | Pena, Brayan C KC | 3 min 17 sec |
| 3 | West Lake Loggers | Ramos, Cesar SP SD | 2 min 28 sec |
| 4 | New York Knights | Daley, Matt RP COL | 1 min 34 sec |
| 5 | Dyersville Spirits | Gervacio, Sammy RP HOU | 9 min 23 sec |
| 6 | Pompano Sugar Kings | Thole, Josh C NYM | 14 sec |
| 7 | New York Knights | Keppinger, Jeff 3B HOU | 10 min 6 sec |
| 8 | South Florida Chupacabras | Parra, Gerardo LF ARI | 22 sec |
| 9 | Mid-Atlantic Diamond Angels | Matsui, Kazuo 2B HOU | 4 min 55 sec |
| 10 | Atlanta Argonauts | Maxwell, Justin CF WAS | 7 min 32 sec |
| 11 | Ontario River Kings | Vargas, Jason M. SP SEA | 37 sec |
| 12 | East Saint Flyers | Fox, Jake 3B OAK | 2 min 18 sec |
| 13 | Meddybemps Lakers | Atkins, Garrett 3B BAL | 1 min 5 sec |
| 14 | South Florida Chupacabras | Allen, Brandon 1B ARI | 56 sec |
| 15 | Atlanta Argonauts | Francisco, Juan 3B CIN | 1 min 58 sec |
| 16 | Mid-Atlantic Diamond Angels | Molina, Bengie C SF | 11 min 12 sec |
| ROUND 5 | |||
| 1 | Indy Colts | Martinez, Fernando OF NYM | 15 sec |
| 2 | North Coast Clippers | Sanches, Brian RP FLA | 1 min 51 sec |
| 3 | Rock River Catfish | Hill, Koyie C CHC | 2 min 37 sec |
| 4 | Meddybemps Lakers | Schlereth, Daniel RP DET | 4 min 35 sec |
| 5 | Bangor Basselopes | Santos, Omir C NYM | 16 min 54 sec |
| 6 | New York Knights | Schafer, Jordan CF ATL | 2 min 36 sec |
| 7 | West Lake Loggers | Hill, Shawn SP TOR | 1 min 25 sec |
| 8 | Ontario River Kings | Burrell, Pat DH TB | 32 sec |
| 9 | New York Knights | Condrey, Clay RP MIN | 3 min 45 sec |
| 10 | Tampico Stogies | Weaver, Jeff SP LA | 4 min 3 sec |
| 11 | Tampico Stogies | Colvin, Tyler LF CHC | 2 sec |
| 12 | East Saint Flyers | Nix, Laynce LF CIN | 2 min 41 sec |
| 13 | Meddybemps Lakers | Gwynn, Tony K. CF SD | 16 sec |
| 14 | Bangor Basselopes | Maloney, Matt SP CIN | 31 sec |
| 15 | Atlanta Argonauts | Walker, Neil 3B PIT | 3 min 56 sec |
| 16 | North Coast Clippers | Hawkins, LaTroy RP MIL | 3 min 40 sec |
| ROUND 6 | |||
| 1 | Tampico Stogies | Chavez, Jesse RP ATL | 2 min 30 sec |
| 2 | Indy Colts | Rosales, Adam 3B OAK | 2 min 42 sec |
| 3 | Rock River Catfish | Barden, Brian 3B FLA | 43 sec |
| 4 | Ontario River Kings | Navarro, Dioner C TB | 13 sec |
| 5 | Meddybemps Lakers | Maysonet, Edwin 2B HOU | 28 sec |
| 6 | Tampico Stogies | Ryal, Rusty 2B ARI | 4 min 42 sec |
| 7 | Indy Colts | Rosales, Leo RP ARI | 5 min 20 sec |
| 8 | Indy Colts | Garcia, Jaime SP STL | 42 sec |
| 9 | Mid-Atlantic Diamond Angels | Narveson, Chris RP MIL | 1 min 46 sec |
| 10 | Meddybemps Lakers | Jacobs, Mike DH NYM | 25 sec |
| 11 | Dyersville Spirits | Vasquez, Esmerling RP ARI | 7 min 5 sec |
| 12 | East Saint Flyers | Smoltz, John SP STL | 6 min 53 sec |
| 13 | Mid-Atlantic Diamond Angels | Rogers, Esmil SP COL | 15 sec |
| 14 | North Coast Clippers | Bastardo, Antonio SP PHI | 4 min 41 sec |
| 15 | Ontario River Kings | Caridad, Esmailin RP CHC | 21 sec |
| 16 | North Coast Clippers | Fisher, Carlos RP CIN | 5 min 48 sec |
| ROUND 7 | |||
| 1 | Tampico Stogies | Veal, Donnie RP PIT | 1 min 52 sec |
| 2 | Tampico Stogies | Cedeno, Ronny SS PIT | 6 sec |
| 3 | Tampico Stogies | Betemit, Wilson 3B KC | 1 min 59 sec |
| 4 | Mid-Atlantic Diamond Angels | Runzler, Dan RP SF | 1 min 36 sec |
| 5 | West Lake Loggers | Jackson, Steve 1B OAK | 1 min 41 sec |
| 6 | North Coast Clippers | Jaramillo, Jason C PIT | 6 min 37 sec |
| 7 | Mid-Atlantic Diamond Angels | Escalona, Sergio RP PHI | 47 sec |
| 8 | Mid-Atlantic Diamond Angels | McCutchen, Daniel SP PIT | 2 min 12 sec |
| 9 | South Florida Chupacabras | Ausmus, Brad C LA | 45 sec |
| 10 | Mid-Atlantic Diamond Angels | Herrera, Danny RP CIN | 2 min 51 sec |
| 11 | Dyersville Spirits | Whiteside, Eli C SF | 1 min 53 sec |
| 12 | East Saint Flyers | Suppan, Jeff SP MIL | 1 min 29 sec |
| 13 | Meddybemps Lakers | Young, Eric O. 2B COL | 27 sec |
| 14 | South Florida Chupacabras | Romero, J.C. RP PHI | 5 min 55 sec |
| 15 | Dyersville Spirits | Wilson, Jack SS SEA | 1 min 40 sec |
| 16 | North Coast Clippers | Leach, Brent RP LA | 2 min 10 sec |
| ROUND 8 | |||
| 1 | Tampico Stogies | No Pick (Skipped) | 2 min 32 sec |
| 2 | North Coast Clippers | Blanco, Andres 2B CHC | 6 min 55 sec |
| 3 | Dyersville Spirits | Lehr, Justin SP CIN | 7 sec |
| 4 | Mid-Atlantic Diamond Angels | Mulvey, Kevin SP ARI | 1 min 16 sec |
| 5 | West Lake Loggers | Garciaparra, Nomar DH OAK | 31 sec |
| 6 | Dyersville Spirits | Michaels, Jason LF HOU | 2 min 58 sec |
| 7 | Meddybemps Lakers | Joaquin, Waldis RP SF | 37 sec |
| 8 | Ontario River Kings | Greene, Tyler SS STL | 3 min 29 sec |
| 9 | Mid-Atlantic Diamond Angels | Nieve, Fernando SP NYM | 7 min 36 sec |
| 10 | Mid-Atlantic Diamond Angels | Hester, John C ARI | 5 min 53 sec |
| 11 | Bangor Basselopes | Martin, J.D. SP WAS | 2 min 14 sec |
| 12 | East Saint Flyers | Ortiz, Russ SP LA | 1 min 24 sec |
| 13 | Mid-Atlantic Diamond Angels | Wellemeyer, Todd SP SF | 3 min 42 sec |
| 14 | South Florida Chupacabras | Reyes, Anthony SP CLE | 28 sec |
| 15 | West Lake Loggers | Scales, Bobby LF CHC | 7 min 9 sec |
| 16 | Ontario River Kings | Towles, J.R. C HOU | 3 min 44 sec |
| ROUND 9 | |||
| 1 | East Saint Flyers | Arias, Alberto RP HOU | 3 min 51 sec |
| 2 | North Coast Clippers | Perdomo, Luis M. RP SD | 9 sec |
| 3 | Rock River Catfish | No Pick (Skipped) | 40 sec |
| 4 | West Lake Loggers | Takahashi, Ken RP NYM | 7 sec |
| 5 | West Lake Loggers | Jennings, Jason RP TEX | 2 min 47 sec |
| 6 | Pompano Sugar Kings | No Pick (Skipped) | 1 min 8 sec |
| 7 | West Lake Loggers | Burns, Mike SP MIL | 50 sec |
| 8 | East Saint Flyers | Dessens, Elmer RP NYM | 3 min 10 sec |
| 9 | South Florida Chupacabras | Amezaga, Alfredo CF LA | 1 min 11 sec |
| 10 | West Lake Loggers | Bautista, Denny RP SF | 47 sec |
| 11 | Atlanta Argonauts | Durango, Luis LF SD | 2 min 28 sec |
| 12 | East Saint Flyers | Springer, Russ RP TB | 4 min 5 sec |
| 13 | West Lake Loggers | Martinez, Cristhian RP FLA | 13 sec |
| 14 | South Florida Chupacabras | Dobbs, Greg 3B PHI | 2 min 48 sec |
| 15 | Ontario River Kings | Penn, Hayden RP FLA | 17 sec |
| 16 | North Coast Clippers | No Pick (Skipped) | 30 sec |
| ROUND 10 | |||
| 1 | East Saint Flyers | Miles, Aaron 2B CIN | 1 min 19 sec |